Peer-Reviewed Publications

Borejdo, J., Muthu, P., Talent, J., Gryczynski, Z., Calander, N., Akopova, I., Shtoyko, T., Gryczynski, I. (2008) Reduction of photobleaching and photodemage in single molecule detection: observing single actin monomer in skeletal myofibrils. J. Biomed. Optics 13 (3) 034021-1-10.

Ballin, J.D., Prevas, J.P., Bharill, S., Gryczynski, I., Gryczynski, Z., Wilson, G.M. (2008) Local RNA Conformational Dynamics Revealed by 2-Aminopurine Solvent Accessibility. Biochemistry 47, 7043-7052.

Muthu, P., Talent, J.M., Gryczynski, I., Borejdo, J. (2008) Cross-Bridge Duty Cycle in Isomeric Contraction of Skeletal Myofibrils. Biochemistry 47, 5657-5667.

Sarkar, P., Bharill, S., Gryczynski, I., Gryczynski, Z., Nair, M.P., Lacko, A.G. (2008) Binding of 8-anilino-1-naphthalenesulfonate to lecithin:cholesterol acyltransferase studied by fluorescence techniques. J. Photochem. Photobiol. B: Biology 92, 19-23.

Bharill, S., Sarkar, P., Ballin, J.D., Gryczynski, I., Wilson, G.M., Gryczynski, Z. (2008) Fluorescence intensity decays of 2-aminopurine solutions: Lifetime distribution approach. Anal. Biochem. 377, 141-149.

Shtoyko, T., Matveeva, E.G., Chang, I-Fen, Gryczynski, Z., Goldys, E., Gryczynski, I. (2008) Enhanced Fluorescent Immunoassays on Silver Fractal-like Structures. Anal. Chem. 80, 1962-1966.

Matveeva, E.G., Shtoyko, T., Gryczynski, I., Akopova, I., Gryczynski, Z. (2008) Fluorescence quenching/enhancement surface assays: signal manipulation using silver-coated gold nanoparticles. Chem. Phys. Lett. 454, 85-90.

Rangelowa, S., Kulak, L., Gryczynski, I., Sarkar, P., Bojarski, P. (2008) Fluorescence anisotropy decay in the presence of multistep energy migration and back transfer in disordered two-component system. Chem. Phys. Lett. 452, 105-109.

Muthu, P., Gryczynski, I., Gryczynski, Z., Talent, J.M., Akopova, I., Borejdo, J. (2008) Decreasing photobleaching by silver nanoparticles on metal surfaces: application to muscle myofibrils. J Biomed Opt. 13(1), 014023-1-9.

Klitgaard, S., Shtoyko, T., Calander, N., Gryczynski, I., Matveeva, E.G., Borejdo, J., Neves-Petersen, T.M., Petersen, S.B., Gryczynski, Z. (2007) Long wavelength depolarized light scattering from silver nanoparticles. Chem. Phys. Lett. 443, 1-5.

Goldys, E.M., Barnett, A., Drozdowicz-Tomsia, K., Gryczynski, I., Matveeva, E.G., Gryczynski, Z., Shtoyko, T. (2007) Plasmon-enhanced fluorescence nearmetallic nanostructures: biochemical applications. Applied Physics A: Materials Science & Processing 89 (2): 265-271.

Ramoni, R. et.al. (2007) The protein scaffold of the lipocalin odorant-binding protein is suitable for the design of new biosensors for the detection of explosive components. J. Phys.: Condens. Matter 19, 1-7.

Goldys, E.M., Drozdowicz-Tomsia, K., Xie, F., Shtoyko, T. Matveeva, E.G., Gryczynski, I., Gryczynski, Z. (2007) Fluorescence Amplification by Electrochemically Deposited Silver Nanowires with Fractal Architecture. JACS, 129, 12117-12122.

Dudkowiak, A., Frackowiak, D., Teslak, E., Gryczynski, Z., Gryczynski, I. (2007) Orientation and spectral properties of two stilbazolium merocyanine dyes in stretched and unstretched polyvinyl alcohol films. Acta Biochim. Polon. 54, 647-656.

Ballin, J.D., Bharill S., Fialcowitz-White, E.J., Gryczynski, I., Gryczynski, Z., Wilson, G. M. (2007) Site-Specific Variations in RNA Folding Thermodynamics Visualized by 2-Aminopurine Fluorescence. Biochemistry, 46, 13948-13960.

Matveeva, E.G., Gryczynski, I., Barnett, A., Calander, N., Gryczynski, Z. (2007) Red blood cells do not attenuate the SPCE fluorescence in surface assays. Ana. Bioanal. Chem. 388, 1127-1135.

Szabelski, M., Bojarski, P., Wiczk, W., Gryczynski, I. (2007) Fluorescence resonance energy transfer in short linear peptides carrying 3-[2-(2-benzofuranyl) benzoxazol-5-yl]-alanine and 3-nitro-L-tyrosine molecules in poly(vinyl alcohol) film. Chem. Phys. Lett. 442, 418-423.

Czuper, A., Gryczynski, I. , Kusba, J. (2007) Forster energy transfer from nonexponentially decaying donors. J. Photochem. Photobiol. B: Biology 87, 200-208.

Muthu, P., Gryczynski, I., Gryczynski, Z., Talent, J., Akopova, I. , Jain, K., Borejdo, J. (2007) Decreasing photobleaching by silver island films: application to muscle. Anal. Biochem. 366, 228-236.

N. Boens et. al. (2007) Fluorescence Lifetime Standards for Time and Frequency Domain Fluorescence Spectroscopy. Anal. Chem. 79, 2137-2149.

Grajek, H., Gryczynski, I., Bojarski, P., Gryczynski, Z., Bharill, S., Kulak, L . (2007) Flavin mononucleotide fluorescence intensity decay in concentrated aqueous solutions. Chem. Phys. Lett. 439, 151-156.

Bojarski, P., Gryczynski, I., Kulak, L., Synak, A., Bharill, S., Rangelowa, S., Szabelski, M. (2007) Multistep energy migration between 3,3'-diethyl-9-methyldicarbocyanine iodide monomers in uniaxially oriented polymer films. Chem. Phys. Lett. 439, 332-336.

Barnett, A., Matveeva, E.G., Gryczynski, I., Gryczynski, Z., Goldys, E.M . (2007) Coupled plasmon effects for the enhancement of fluorescence immunoassays. Physica B 394, 297-300.

Matveeva, E.G., Gryczynski, I. , Barnett, A., Leonenko, Z., Lakowicz, J.R., Gryczynski, Z. (2007) Metal particle-enhanced fluorescent immunoassays on metal mirrors. Anal. Biochem. 363, 239-245.

Calander, N., Gryczynski, I. , Gryczynski, Z. (2007) Interference of surface plasmon resonances causes enhanced depolarized light scattering from metal nanoparicles. Chem. Phys. Lett. 434, 326-330.

Bojarski, P., Gryczynski, I., Kulal, L., Synak, A., Barnett, A. (2006) Excitation energy migration between elonga ted fluorophores in uniaxially oriented polyvinyl alcohol films) Chem.Phys.Lett., 431, 94-99.

Zelent, B., Vanderkooi, J.M., Coleman, R.G., Gryczynski, I. , Gryczynski, Z. (2006) Protonation of excited state pyrene-1-carboxylate by phosphate and organic acids in aqueous solution studied by fluorescence spectroscopy.Biophys. J., 91, 3864-3871.

Borejdo, J., Gryczynski, Z., Calander, N., Muthu, P., Gryczynski, I. Application of Surface plasmon Coupled Emission to Study Muscle. (2006) Biophys. J. 91, 2626-2635.

Borejdo, J., Calander, N., Gryczynski, Z., Gryczynski, I. (2006) Fluorescence correlation spectroscopy in surface plasmon coupled emission microscope. Optics Express 14, 7878-7888.

Dosev, D., Kennedy, M., Godlewski, M., Gryczynski, I., Tomsia, K., Goldys, E.M. (2006) Fluorescence upconversion in Sm-doped Gd2O3. Applied Physics Letters 88, 011906,1-3.

Gryczynski, Z., Borejdo, J., Calander, N., Matveeva, E.G., Gryczynski, I. (2006) Minimization of detection volume by surface-plasmon-coupled emission. Analytical Biochem. 356, 125-131.

Borejdo, J., Talent, J. & Akopova, I. (2006) Measuring rotations of a few cross-bridges in skeletal muscle. Exp. Biol. & Med, 231(1), 28-38.

Borejdo, J., Talent, J., Akopova, I. & Burghardt, T.P. (2006) Rotations of a few cross-bridges in muscle by confocal total internal reflection microscopy. Biochim. Biophys. Acta, 1763, 137-140.

Burghardt, T.P, Ajtai, K. & Borejdo, J. (2006). Attoliter Detection Volume with Objective Total Internal Reflection. Biochemistry, 45(13), 4058-68

Gryczynski, I., Malicka, J., Nowaczyk, K., Gryczynski, Z., Lakowicz, J.R. J. (2006). Waveguide-modulated surface plasmon-coupled emission of Nile blue in poly(vinyl alcohol) thin films. Thin Solid Films 510, 15-20.

Zhang, J., Gryczynski, I., Gryczynski, Z., Lakowicz, J.R. J. (2006). Dye-Labeled Silver Nanoshell - Bright Particle. Phys. Chem. 110, 8986-8991.

Gryczynski, Z., Lukomska, J., Lakowicz, J.R., Matveeva, E.G., Gryczynski, I. (2006). Depolarized light scattering from silver nanoparticles. Chem. Phys. Lett. 421, 189-192.

Lukomska, J., Gryczynski, I., Malicka, J., Makowiec, S., Lakowicz, J.R., Gryczynski, Z. (2006) One- and Two-Photon Induced Fluorescence of Pacific Blue-Labeled Human Serum Albumin Deposited on Different Core Size Silver Colloids. Biopolymers 81, 249-255.

A. Marabotti, P. Herman, M. Staiano, A. Varrale, M. De Champdore, M. Rossi, Z. Gryczynski, and S. D'Auria. (2006) Pressure Effect on the Stability and the Conformational Dynamics of the D-Galactose/D-Glucose-Binding Protein from Escheria coli. Proteins: Struct. Funct. And Bioinfor., 62:193-201.

Kostov, Y., Smith, D.S., Tolosa, L., Rao, G., Gryczynski, I., Gryczynski, Z., Malicka, J., Lakowicz, J.R. J. (2005) Directional Surface Plasmon-Coupled Emission from a 3nm Green Fluorescent Protein Monolayer. Biotechnol. Prog. 21, 1731-1735.

Matveeva, E.G., Gryczynski, I., Malicka, J., Gryczynski, Z., Goldys, E., Howe, J., Brndt, K.W., Lakowicz, J.R., J. (2005) Plastic Versus Glass Support for an Immunoassay on Metal-Coated Surfaces in Optically Dense Samples Utilizing Directional Surface Plasmon-Coupled Emission. Fluorescence 15, 865-871.

Kobayashi, M., Z. Gryczynski, J. Lukomska, J. Feng, M. Roberts, J. Lakowicz, J. W. Lomasney. (2005) Spectroscopic Characterization of the EF-had domain of phospholipase C ?1: Identification of a lipid interacting domain. Arch. of Biochem. Biophysics., Vol. 440, 191-203.

Lakowicz JR, Malicka J, Matveeva,E, Gryczynski I, Gryczynski Z. (2005) Plasmonic technology: novel approach to ultrasensitive immunoassays. Clin Chem. Oct; 51(10): 1914-1922.

Smith, D.S., Kostov, Y., Rao, G., Gryczynski, I., Malicka, J., Gryczynski, Z., Lakowicz, J.R. J (2005) First Observation Of Surface Plasmon-Coupled Emission Due to LED Excitation. Fluoresc. 15, 895-900.

Buskiewicz, I., Peske, F., Wieden, H.J., Gryczynski, I., Rodnina, M.V. and Wintermeyer, W.J. (2005) Conformations of the Signal Recognition Particle Protein Ffh from Escherichia coli as Determinedby FRET. Mol. Biol. 351, 417-430.

Book Chapters

Gryczynski, Z., Matveeva, E.G., Calander, N., Zhang, J., Lakowicz, J.R., Gryczynski, I. (2007) Surface Plasmon Coupled Emission, pp. 247-265, in Surface Plasmon Nanophotonics (Brongersma, M.L., Kik, P.G., eds.) Springer, Dordrecht , The Netherlands .

Basics of Fluorescence and FRET (2005) in Molecular Imaging (A. Periasamy and R.N. Day, eds.) Oxford University Press, pp.21-56.